STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepACytosol aminopeptidase family protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (492 aa)    
Predicted Functional Partners:
AM1_3796
Peptidase M1, membrane alanine aminopeptidase; Peptidase M1 and conserved PBS lyase HEAT-like repeat protein.
   
 0.928
ggt
Gamma-glutamyltransferase.
     
 0.925
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
   
 
 0.921
AM1_6346
Glutathione synthetase, putative.
   
 
 0.921
AM1_4771
Conserved hypothetical protein.
     
  0.900
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.835
cysK
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.832
AM1_5090
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; Also member of COG0031, cysteine synthases.
   
 0.832
AM1_2621
Aspartate aminotransferase.
   
  0.813
AM1_6344
Cysteine dioxygenase type I family, putative.
     
  0.800
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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