STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_3011Conserved hypothetical protein. (291 aa)    
Predicted Functional Partners:
AM1_4447
ABC transporter ATP-binding protein.
  
     0.614
AM1_3012
Conserved hypothetical protein.
   
   0.566
AM1_2912
MOSC domain containing protein.
  
     0.561
AM1_3013
Fe-S metabolism protein, SufE family.
 
     0.509
AM1_6353
Conserved hypothetical protein.
  
     0.479
AM1_1781
Ribulose bisphosphate carboxylase activase, putative.
  
     0.452
AM1_3705
TPR domain protein, putative.
  
    0.448
AM1_3014
Cobalamin synthesis protein/P47K.
  
    0.437
AM1_3147
Conserved domain protein.
  
     0.432
AM1_5001
Hypothetical protein.
  
     0.430
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.