STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_3109Ferredoxin, 2Fe-2S type, putative. (110 aa)    
Predicted Functional Partners:
psaE
Photosystem I protein PsaE; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
 
 
 0.598
AM1_3110
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
     
 0.568
AM1_3108
Hypothetical protein.
       0.526
AM1_5198
Conserved hypothetical protein.
  
     0.523
AM1_6371
Carbon dioxide hydration protein.
  
     0.507
AM1_6044
Conserved hypothetical protein.
  
     0.481
AM1_1127
Hypothetical protein.
  
     0.479
AM1_4031
Ferredoxin-thioredoxin reductase catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
 
 
 0.473
AM1_6355
Glutamate synthase [NADPH] small chain.
    
 0.469
AM1_5377
Carbon dioxide hydration protein.
  
     0.461
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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