STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_3181PpiC-type peptidyl-prolyl cis-trans isomerase domain containing protein. (250 aa)    
Predicted Functional Partners:
AM1_3183
HlyD family secretion protein.
 
     0.948
AM1_3182
Type I secretion system ABC transporter, ATPase protein.
 
  
 0.946
AM1_0432
Conserved hypothetical protein.
  
     0.772
AM1_2050
Conserved hypothetical protein.
  
     0.741
AM1_2930
Conserved hypothetical protein.
  
     0.705
AM1_2654
Conserved hypothetical protein.
  
     0.700
AM1_2510
Haemagglutination activity domain protein.
  
     0.686
AM1_4044
Conserved hypothetical protein.
  
     0.685
AM1_3666
Transcriptional regulator domain protein.
  
     0.667
AM1_4965
Haemagglutination activity domain protein.
  
     0.651
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.