STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_3383TonB-dependent siderophore receptor protein. (849 aa)    
Predicted Functional Partners:
AM1_3382
Transcriptional regulator, AraC family.
 
   
 0.688
AM1_4724
Hypothetical protein.
 
 
 0.588
AM1_0106
Hypothetical protein.
  
 
 0.536
AM1_3503
Conserved hypothetical protein.
  
 
 0.524
AM1_1109
Isochorismate synthase.
   
  
 0.506
AM1_3707
Oxidoreductase, 2OG-Fe(II) oxygenase family protein.
 
    0.491
AM1_3384
Hypothetical protein.
       0.479
AM1_3403
TonB-dependent siderophore receptor protein.
  
  
0.441
AM1_3360
Transcriptional regulator, AraC family.
  
   
 0.438
AM1_3398
TonB-dependent siderophore receptor protein.
  
  
0.438
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.