STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_3485Conserved hypothetical protein. (94 aa)    
Predicted Functional Partners:
AM1_3484
Conserved hypothetical protein.
 
     0.822
AM1_2947
Conserved hypothetical protein.
  
     0.763
AM1_5747
Conserved hypothetical protein.
  
     0.760
AM1_6265
FHA domain protein.
  
     0.751
AM1_2312
Conserved hypothetical protein.
  
     0.750
AM1_2946
Conserved hypothetical protein.
  
     0.749
AM1_3153
Conserved hypothetical protein.
  
     0.749
AM1_4238
Conserved hypothetical protein.
  
     0.747
AM1_3039
Conserved hypothetical protein.
  
     0.746
AM1_3601
Conserved hypothetical protein.
  
     0.745
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.