STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_3536Endo-1,4-beta-xylanase, putative. (532 aa)    
Predicted Functional Partners:
AM1_2816
Cellulase.
 
   
 0.624
AM1_1172
Conserved hypothetical protein.
    
 
 0.617
rfc-2
O-Antigen polymerase, putative.
       0.587
AM1_2718
FG-GAP repeat domain protein.
 
   
 0.560
AM1_3194
Type I secretion target repeat protein; A domain of this peptide also matches family PF00722: Glycosyl hydrolases family 16.
 
   
 0.540
AM1_4420
Esterase, putative.
 
 
 
 0.540
AM1_2187
Conserved hypothetical protein.
  
     0.472
AM1_2814
Glycoside hydrolase family 2, sugar binding; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.419
AM1_3538
Conserved hypothetical protein.
       0.419
AM1_3539
Hypothetical protein.
       0.407
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.