STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdsA-2Phosphatidate cytidylyltransferase. (244 aa)    
Predicted Functional Partners:
AM1_1653
Conserved hypothetical protein.
  
     0.565
psb28
Photosystem II protein Psb28 PsbW; Belongs to the Psb28 family.
  
     0.518
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.513
AM1_4875
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative.
   
 
 0.513
AM1_1931
Acyltransferase family protein.
     
  0.499
AM1_3311
Acyltransferase family protein.
     
  0.499
AM1_3443
Phospholipid/glycerol acyltransferase.
     
  0.499
AM1_3515
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
  0.499
AM1_4290
Hypothetical protein.
       0.488
psbO
Photosystem II manganese-stabilizing protein PsbO.
  
     0.458
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.