Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AM1_1945 | AM1_6329 | AM1_1945 | AM1_6329 | TPR domain protein. | TPR domain protein. | 0.452 |
AM1_1945 | alaS | AM1_1945 | AM1_4444 | TPR domain protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.800 |
AM1_3269 | AM1_6329 | AM1_3269 | AM1_6329 | TPR domain protein. | TPR domain protein. | 0.447 |
AM1_3269 | alaS | AM1_3269 | AM1_4444 | TPR domain protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.800 |
AM1_3902 | AM1_6329 | AM1_3902 | AM1_6329 | Conserved hypothetical protein. | TPR domain protein. | 0.438 |
AM1_3902 | alaS | AM1_3902 | AM1_4444 | Conserved hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.800 |
AM1_5446 | AM1_6329 | AM1_5446 | AM1_6329 | TPR domain protein. | TPR domain protein. | 0.430 |
AM1_5446 | alaS | AM1_5446 | AM1_4444 | TPR domain protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.800 |
AM1_6065 | AM1_6329 | AM1_6065 | AM1_6329 | TPR domain protein. | TPR domain protein. | 0.464 |
AM1_6065 | alaS | AM1_6065 | AM1_4444 | TPR domain protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.800 |
AM1_6329 | AM1_1945 | AM1_6329 | AM1_1945 | TPR domain protein. | TPR domain protein. | 0.452 |
AM1_6329 | AM1_3269 | AM1_6329 | AM1_3269 | TPR domain protein. | TPR domain protein. | 0.447 |
AM1_6329 | AM1_3902 | AM1_6329 | AM1_3902 | TPR domain protein. | Conserved hypothetical protein. | 0.438 |
AM1_6329 | AM1_5446 | AM1_6329 | AM1_5446 | TPR domain protein. | TPR domain protein. | 0.430 |
AM1_6329 | AM1_6065 | AM1_6329 | AM1_6065 | TPR domain protein. | TPR domain protein. | 0.464 |
AM1_6329 | alaS | AM1_6329 | AM1_4444 | TPR domain protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.818 |
alaS | AM1_1945 | AM1_4444 | AM1_1945 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | TPR domain protein. | 0.800 |
alaS | AM1_3269 | AM1_4444 | AM1_3269 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | TPR domain protein. | 0.800 |
alaS | AM1_3902 | AM1_4444 | AM1_3902 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Conserved hypothetical protein. | 0.800 |
alaS | AM1_5446 | AM1_4444 | AM1_5446 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | TPR domain protein. | 0.800 |
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