Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AM1_2306 | tag | AM1_2306 | AM1_4494 | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | DNA-3-methyladenine glycosylase I. | 0.508 |
AM1_4493 | tag | AM1_4493 | AM1_4494 | YHS domain protein, putative. | DNA-3-methyladenine glycosylase I. | 0.467 |
guaA | polA | AM1_4428 | AM1_2151 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.710 |
guaA | tag | AM1_4428 | AM1_4494 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | DNA-3-methyladenine glycosylase I. | 0.724 |
mutY | polA | AM1_3918 | AM1_2151 | A/G-specific adenine glycosylase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.464 |
mutY | tag | AM1_3918 | AM1_4494 | A/G-specific adenine glycosylase. | DNA-3-methyladenine glycosylase I. | 0.500 |
polA | guaA | AM1_2151 | AM1_4428 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.710 |
polA | mutY | AM1_2151 | AM1_3918 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | A/G-specific adenine glycosylase. | 0.464 |
polA | tag | AM1_2151 | AM1_4494 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA-3-methyladenine glycosylase I. | 0.576 |
tag | AM1_2306 | AM1_4494 | AM1_2306 | DNA-3-methyladenine glycosylase I. | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.508 |
tag | AM1_4493 | AM1_4494 | AM1_4493 | DNA-3-methyladenine glycosylase I. | YHS domain protein, putative. | 0.467 |
tag | guaA | AM1_4494 | AM1_4428 | DNA-3-methyladenine glycosylase I. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.724 |
tag | mutY | AM1_4494 | AM1_3918 | DNA-3-methyladenine glycosylase I. | A/G-specific adenine glycosylase. | 0.500 |
tag | polA | AM1_4494 | AM1_2151 | DNA-3-methyladenine glycosylase I. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.576 |