STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_4635Major facilitator superfamily transporter. (494 aa)    
Predicted Functional Partners:
AM1_4636
Glycosyl transferase, group 1, putative.
 
     0.859
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.791
AM1_0037
Acetyltransferase, gnat family.
  
     0.680
AM1_3834
Conserved hypothetical protein.
  
     0.635
AM1_4472
Conserved hypothetical protein.
  
     0.628
AM1_4029
Conserved hypothetical protein; Similar to organic solvent tolerant proteins.
  
     0.627
AM1_3400
Major facilitator superfamily transporter.
  
     0.608
AM1_6049
Conserved hypothetical protein.
  
     0.588
AM1_3721
Conserved hypothetical protein.
  
     0.584
AM1_3390
Major facilitator superfamily transporter.
  
     0.571
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.