STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_4875CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative. (198 aa)    
Predicted Functional Partners:
cdsA
Phosphatidate cytidylyltransferase.
    
 0.918
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
cinA
Competence damage-inducible protein CinA, putative; Belongs to the CinA family.
  
  
 0.863
AM1_4354
Conserved hypothetical protein.
  
    0.676
AM1_4877
Hypothetical protein.
       0.636
AM1_4874
Transposase, IS5 family, putative; Has a domain with similarity to IS4 family transposases.
       0.608
AM1_3496
Ankyrin repeat-containing protein.
  
 
   0.529
cdsA-2
Phosphatidate cytidylyltransferase.
   
 
 0.513
cdsA-3
Phosphatidate cytidylyltransferase.
   
 
 0.513
AM1_4722
Conserved hypothetical protein.
  
     0.469
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.