Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AM1_0853 | AM1_1659 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.771 |
AM1_0853 | AM1_2312 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.441 |
AM1_0853 | AM1_2946 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.772 |
AM1_0853 | AM1_2947 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.691 |
AM1_0853 | AM1_3777 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.752 |
AM1_0853 | AM1_4973 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.771 |
AM1_0853 | AM1_5145 | Conserved hypothetical protein. | Two-component sensor histidine kinase, putative. | 0.740 |
AM1_1659 | AM1_0853 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.771 |
AM1_1659 | AM1_2312 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.768 |
AM1_1659 | AM1_2946 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.774 |
AM1_1659 | AM1_2947 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.769 |
AM1_1659 | AM1_3601 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.759 |
AM1_1659 | AM1_3777 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
AM1_1659 | AM1_4478 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.703 |
AM1_1659 | AM1_4973 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.775 |
AM1_1659 | AM1_5145 | Conserved hypothetical protein. | Two-component sensor histidine kinase, putative. | 0.773 |
AM1_1659 | AM1_5477 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.774 |
AM1_2312 | AM1_0853 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.441 |
AM1_2312 | AM1_1659 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.768 |
AM1_2312 | AM1_2946 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.743 |
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