STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_5189Cell shape determining protein, MreB/Mrl family. (345 aa)    
Predicted Functional Partners:
mreC
Rod shape-determining protein MreC, putative.
 
 
 0.973
AM1_3437
Penicillin-binding protein, putative.
 
 
 0.852
AM1_4354
Conserved hypothetical protein.
  
 
 0.845
rodA
Cell cycle protein, FtsW/RodA/SpoVE family; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
 
 0.827
AM1_1811
Cell division protein, FtsW/RodA/SpoVE superfamily; Belongs to the SEDS family.
 
 
 0.683
AM1_5187
Conserved hypothetical protein.
  
  
 0.661
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.537
minD
Septum site-determining protein MinD.
 
 
 0.504
AM1_5190
Sugar ABC transporter, permease protein, putative.
       0.486
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase, putative; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
  
 0.450
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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