STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_5324WD-repeat protein. (346 aa)    
Predicted Functional Partners:
AM1_5434
WD-40 repeat protein.
 
     0.942
AM1_3159
Conserved hypothetical protein.
 
      0.894
AM1_5480
Serine/threonine protein kinase.
 
      0.835
AM1_3645
Serine/threonine protein kinase.
 
      0.816
AM1_3952
Serine/threonine-protein kinase.
 
      0.785
AM1_1377
Serine/threonine protein kinase.
 
      0.779
AM1_2886
Serine/threonine protein kinase.
 
      0.772
AM1_2179
Serine/threonine kinase.
 
      0.761
AM1_4542
Serine/threonine kinase with pentapeptide repeats.
 
      0.755
AM1_4747
Conserved hypothetical protein.
 
 
  0.748
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.