STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_5348DoxX, putative. (157 aa)    
Predicted Functional Partners:
AM1_5347
Conserved hypothetical protein.
       0.601
AM1_1029
Conserved hypothetical protein.
  
     0.582
AM1_6149
GUN4-like family protein.
  
     0.556
dinF
DNA-damage-inducible protein, putative.
 
    0.469
AM1_1855
Oxidoreductase, short chain dehydrogenase/reductase family protein.
  
    0.466
AM1_5346
Hydrolase, HAD-superfamily.
       0.437
AM1_3807
Transmembrane protein 14C.
  
     0.436
AM1_4831
Hypothetical protein.
  
     0.432
AM1_3636
Hypothetical protein.
  
     0.420
AM1_3060
Conserved hypothetical protein.
  
 
   0.412
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.