STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_5629Conserved hypothetical protein. (244 aa)    
Predicted Functional Partners:
AM1_4888
PAP fibrillin.
  
     0.770
AM1_2487
Conserved domain protein; Similar to CP12 domain.
  
     0.766
AM1_2489
CP12 domain protein.
  
     0.766
ccb2
Cytochrome c biogenesis protein, putative, Ccb2; Gene named and identified based upon findings in Kuras, Richard, Denis Saint-Marcous, Francis-Andre Wollman and Catherine de Vitry. ''A specific c-type cytochrome maturation system is required for oxygenic photosynthesis.'' PNAS 104(2007): 9906-991.
  
     0.760
AM1_4451
Conserved hypothetical protein.
  
     0.760
AM1_4669
Conserved hypothetical protein.
  
     0.747
AM1_4129
Conserved hypothetical protein.
  
     0.746
AM1_4220
Conserved hypothetical protein.
  
     0.745
AM1_1459
Conserved hypothetical protein.
  
     0.743
psb29
Photosystem II biogenesis protein Psb29; May be involved in photosynthetic membrane biogenesis.
  
     0.740
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.