STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bphPBacteriophytochrome. (847 aa)    
Predicted Functional Partners:
AM1_1727
Signal transduction histidine kinase.
   
 0.915
AM1_3870
PAS/PAC sensor signal transduction histidine kinase.
   
 0.894
AM1_5924
Conserved hypothetical protein.
    
 0.883
AM1_1186
Serine/threonine protein kinase and signal transduction histidine kinase (STHK) with GAF and PAS/PAC sensor.
   
 
 0.806
AM1_0287
Signal transduction histidine kinase.
   
 0.797
AM1_1557
Two-component hybrid sensor and regulator.
  
 
 0.794
AM1_5895
Response regulator reciever protein.
     
 0.761
AM1_0285
Two-component hybrid histidine kinase sensor and regulator.
 
 
 0.736
AM1_1870
Two-component hybrid sensor and regulator histidine kinase.
   
 
0.709
AM1_1963
Two-component signal transduction sensor histidine kinase.
 
 
 0.675
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.