STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_5991Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (325 aa)    
Predicted Functional Partners:
AM1_5990
Branched chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
AM1_0862
Urea/ branched-chain amino acid ABC transporter, permease protein, putative; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
AM1_5988
Branched chain amino acid ABC transporter, ATP-binding protein, putative.
 
 
 0.992
AM1_5989
Branched chain amino acid ABC transporter, ATP-binding subunit, putative.
 
 0.991
AM1_5992
ABC transporter, periplasmic solute-binding protein, putative; Possible urea/ amine transporter.
 
 
 0.986
AM1_0864
Urea/ branched-chain amino acid ABC transporter, substrate-binding protein, putative.
 
 
 0.971
AM1_0860
Urea/ branched-chain amino acid ABC transporter, ATP-binding protein.
 
 
 0.967
AM1_0861
Urea/ branched-chain amino acid ABC transporter, ATP-binding protein.
 
 0.966
AM1_4270
Branched-chain amino acid ABC transporter ATP-binding protein.
  
 0.940
AM1_0863
Urea/ branched-chain amino acid ABC transporter, permease protein, putative; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.913
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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