STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtLLycopene beta cyclase CrtL. (411 aa)    
Predicted Functional Partners:
AM1_3692
Carotene 7,8-desaturase/zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
 0.946
AM1_1491
Carotene isomerase, putative; Amine oxidase and carotenoid isomerase (CrtH), putative.
 
 
 0.941
crtR
Beta-carotene hydroxylase.
   
 
 0.914
cruP
Lycopene cyclase; FAD dependent oxidoreductase family.
     
  0.900
cruP-2
Lycopene cyclase; Oxidoreductase family protein, FAD-binding.
     
  0.900
cruA
Lycopene cyclase; FAD-binding oxidoreductase family protein.
     
  0.900
chlD
Magnesium protoporphyrin IX chelatase, D subunit; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
  
 0.570
AM1_6074
Hypothetical protein.
       0.555
AM1_3093
Conserved hypothetical protein.
  
     0.525
crtP
Phytoene desaturase/phytoene desaturase; CrtP is correspond to PDS in higher plants.
  
   
 0.523
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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