STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_6282GAF domain protein. (1980 aa)    
Predicted Functional Partners:
AM1_1963
Two-component signal transduction sensor histidine kinase.
  
 
 0.999
AM1_5108
PAS/PAC sensor signal transduction histidine kinase.
  
 
 0.999
AM1_5688
Two-component hybrid sensor and regulator histidine kinase, putative.
  
 
 0.999
AM1_1185
Serine/threonine protein kinase and signal transduction histidine kinase (STHK) with GAF and PAS/PAC sensor.
  
 
 0.954
AM1_5107
Serine/threonine protein kinase and signal transduction histidine kinase (STHK) with GAF and PAS/PAC sensor.
  
 
 0.954
AM1_5997
Two-component hybrid sensor and regulator histidine kinase.
  
 
 0.939
AM1_0515
Two-component transcriptional regulator, LuxR family.
 
 
 0.936
AM1_1566
Two-component transcriptional regulator, LuxR family.
 
 
 0.936
AM1_6313
Two component transcriptional regulator, LuxR family.
 
 
 0.936
AM1_0267
Two-component transcriptional regulator, LuxR family.
 
 
 0.935
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.