STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_6376Phosphoglycerate mutase, putative. (400 aa)    
Predicted Functional Partners:
AM1_6377
Glycosyl transferase, group 2 family protein, putative.
       0.773
AM1_1138
Phosphoglycerate mutase, putative.
  
     0.757
AM1_6374
Two-component sensor histidine kinase.
 
     0.693
AM1_6375
Carbohydrate-selective porin, OprB family; Belongs to the OprB family.
       0.636
AM1_4688
Containing conserved hypothetic CbiG and CobJ domain proteins.
  
  
 0.461
cobS
Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
  
 0.432
AM1_6378
Oxidoreductase, aldo/keto reductase family protein.
       0.427
cobU
Cobinamide kinase / cobinamide phosphate guanyltransferase.
 
  
 0.403
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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