STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_6385Conserved hypothetical protein. (399 aa)    
Predicted Functional Partners:
AM1_6381
ABC transporter, permease/ATP-binding protein.
 
     0.836
AM1_6382
Glycosyl transferase, group 1 family protein.
 
     0.767
AM1_6384
Conserved hypothetical protein.
 
    
0.750
AM1_6383
Conserved hypothetical protein.
 
    
0.728
AM1_6379
Glycosyl transferase, group 2 family protein.
 
     0.630
AM1_1906
Group 1 glycosyltransferase, putative.
 
     0.589
AM1_5715
Glycosyl transferase, group 1 family protein.
 
     0.548
AM1_6374
Two-component sensor histidine kinase.
  
     0.539
AM1_5729
Glycosyl transferase, group 1 family protein.
  
     0.525
AM1_6375
Carbohydrate-selective porin, OprB family; Belongs to the OprB family.
  
     0.512
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.