STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_6392Alpha-mannosidase. (1041 aa)    
Predicted Functional Partners:
AM1_6390
Hypothetical protein.
       0.565
AM1_2814
Glycoside hydrolase family 2, sugar binding; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.536
AM1_1738
Sugar ABC transporter, periplasmic sugar-binding protein, putative.
 
     0.510
AM1_2913
ROK family sugar kinase.
 
  
 0.490
AM1_1211
Conserved hypothetical protein.
  
    0.484
AM1_4794
Response regulator.
  
    0.484
AM1_2129
Conserved hypothetical protein.
 
     0.428
AM1_6393
Transposase, putative.
       0.424
AM1_0550
Phospholipase D/Transphosphatidylase.
  
    0.417
AM1_2790
Beta-glucosidase.
 
  
 0.417
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.