STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A55_10910Uncharacterized protein. (368 aa)    
Predicted Functional Partners:
B0A55_00381
Uncharacterized protein.
   
 
 0.929
B0A55_06774
Uncharacterized protein.
    
   0.869
B0A55_10391
Uncharacterized protein.
    
   0.863
B0A55_05131
L51_S25_CI-B8 domain-containing protein.
   
   0.843
B0A55_06486
Uncharacterized protein.
    
 
 0.841
B0A55_09177
Ribosomal_L18e/L15P domain-containing protein.
   
   0.839
B0A55_07048
MRP-L46 domain-containing protein.
   
   0.839
B0A55_04434
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
   0.839
B0A55_06095
Uncharacterized protein.
   
   0.839
B0A55_00342
Uncharacterized protein.
   
   0.839
Your Current Organism:
Friedmanniomyces simplex
NCBI taxonomy Id: 329884
Other names: CBS 116775, CBS 116775 (ex-type); CCFEE 5184, CCFEE 5184, F. simplex, Friedmanniomyces simplex Selbmann, de Hoog, Mazzaglia, Friedmann & Onofri, 2005
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