STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A55_08131Uncharacterized protein. (561 aa)    
Predicted Functional Partners:
B0A55_09596
Uncharacterized protein.
   
 0.955
B0A55_04507
Uncharacterized protein.
   
 0.951
B0A55_02521
Uncharacterized protein.
   
 0.950
B0A55_02936
Protein transport protein sec13; Belongs to the WD repeat SEC13 family.
    
 0.947
B0A55_03720
Nsp1_C domain-containing protein.
   
 0.943
B0A55_07547
Uncharacterized protein.
   
 0.942
B0A55_11068
Uncharacterized protein.
    
 0.896
B0A55_09643
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.889
B0A55_09134
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.889
B0A55_05330
NUP214 domain-containing protein.
   
 0.886
Your Current Organism:
Friedmanniomyces simplex
NCBI taxonomy Id: 329884
Other names: CBS 116775, CBS 116775 (ex-type); CCFEE 5184, CCFEE 5184, F. simplex, Friedmanniomyces simplex Selbmann, de Hoog, Mazzaglia, Friedmann & Onofri, 2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.