STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_16452BTP domain-containing protein. (273 aa)    
Predicted Functional Partners:
B0A54_10651
Uncharacterized protein.
    
 
 0.953
B0A54_08444
Uncharacterized protein.
    
 
 0.953
B0A54_16450
TAFII55_N domain-containing protein.
    
 
 0.946
B0A54_15195
DUF3591 domain-containing protein.
    
   0.946
B0A54_12626
TFIID_20kDa domain-containing protein.
    
   0.946
B0A54_13405
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
   0.946
B0A54_11813
TAFII55_N domain-containing protein.
    
 
 0.946
B0A54_09192
TAF domain-containing protein.
    
   0.946
B0A54_06563
Uncharacterized protein.
    
   0.946
B0A54_04877
WD_REPEATS_REGION domain-containing protein.
    
   0.946
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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