STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_16447PX domain-containing protein. (1027 aa)    
Predicted Functional Partners:
B0A54_15384
V-SNARE coiled-coil homology domain-containing protein.
    
 0.718
TRM5-2
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
 
      0.658
B0A54_16022
Uncharacterized protein.
    
 0.632
B0A54_15663
Uncharacterized protein.
    
 0.632
B0A54_17228
Uncharacterized protein.
    
  0.622
B0A54_13354
Uncharacterized protein.
    
  0.622
B0A54_01371
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.619
B0A54_00110
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.619
B0A54_06882
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.617
B0A54_00986
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.617
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.