STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_16812Uncharacterized protein. (282 aa)    
Predicted Functional Partners:
B0A54_10136
Uncharacterized protein.
    
 0.684
B0A54_05127
Uncharacterized protein.
    
 0.684
B0A54_09749
Uncharacterized protein.
    
 0.673
B0A54_00595
Uncharacterized protein.
    
 0.664
B0A54_01226
SMN domain-containing protein.
    
 0.664
B0A54_06239
DNA polymerase.
   
 0.655
B0A54_03143
DNA polymerase.
   
 0.655
B0A54_15974
ERCC4 domain-containing protein; Belongs to the histidine acid phosphatase family.
    
 0.640
B0A54_15358
ERCC4 domain-containing protein.
    
 0.640
B0A54_08423
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.624
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.