STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_15166Uncharacterized protein. (495 aa)    
Predicted Functional Partners:
B0A54_11620
rRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.993
B0A54_11077
rRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.993
B0A54_08311
Uncharacterized protein.
   
 
 0.985
B0A54_08310
Nucleolar protein 56.
   
 
 0.985
B0A54_03800
Nucleolar protein 56.
   
 
 0.985
B0A54_02222
ATP-dependent RNA helicase DBP2; Belongs to the DEAD box helicase family.
   
 
 0.951
B0A54_00271
ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family.
   
 
 0.951
B0A54_12278
RRM domain-containing protein.
   
   0.950
B0A54_08641
RRM domain-containing protein.
   
   0.950
B0A54_01813
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 
 0.936
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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