STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_15406Cytochrome b561 domain-containing protein. (414 aa)    
Predicted Functional Partners:
B0A54_16155
Uncharacterized protein.
   
 
 0.847
B0A54_03209
Uncharacterized protein.
   
   0.813
B0A54_15591
Uncharacterized protein.
   
 
 0.758
B0A54_15479
Uncharacterized protein.
   
 
 0.758
B0A54_14111
MRP-L46 domain-containing protein.
   
   0.748
B0A54_11309
MRP-L46 domain-containing protein.
   
   0.748
B0A54_11503
Uncharacterized protein.
   
   0.740
B0A54_00533
Uncharacterized protein.
   
   0.740
B0A54_14633
Uncharacterized protein.
   
   0.694
B0A54_08856
Uncharacterized protein.
   
   0.694
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.