STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_15681Brix domain-containing protein. (431 aa)    
Predicted Functional Partners:
B0A54_01225
RRM domain-containing protein.
   
 
 0.997
B0A54_00594
RRM domain-containing protein.
   
 
 0.997
B0A54_16109
Protein MAK16; Belongs to the MAK16 family.
   
 
 0.996
B0A54_09323
Protein MAK16; Belongs to the MAK16 family.
   
 
 0.996
B0A54_11481
Uncharacterized protein.
   
 
 0.992
B0A54_10373
Uncharacterized protein.
   
 
 0.992
B0A54_09005
Uncharacterized protein.
   
 
 0.992
B0A54_12711
Uncharacterized protein.
   
 
 0.992
B0A54_16267
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.990
B0A54_15704
Brix domain-containing protein.
   
 
 0.990
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.