STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_15132Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (522 aa)    
Predicted Functional Partners:
B0A54_12398
Uncharacterized protein.
    
 0.997
B0A54_00747
Uncharacterized protein.
    
 0.997
B0A54_13099
Uncharacterized protein.
   
 0.922
B0A54_09915
Uncharacterized protein.
    
 0.922
B0A54_04332
Uncharacterized protein.
    
 0.922
B0A54_07709
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
   
 0.913
B0A54_01509
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
   
 0.913
B0A54_16780
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.907
B0A54_13920
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.907
B0A54_15131
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.899
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.