B0A54_13403 protein (Friedmanniomyces endolithicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B0A54_13403

Flavodoxin-like domain-containing protein. (761 aa)

Predicted Functional Partners:

B0A54_09444

0.765

B0A54_01742

0.765

B0A54_12273

0.762

B0A54_08636

0.760

B0A54_17039

0.691

B0A54_10839

0.678

B0A54_07351

0.650

B0A54_06704

0.611

B0A54_11388

0.610

B0A54_14671

0.585

Your Current Organism:

Friedmanniomyces endolithicus

NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A54_01742	B0A54_13403	A0A4V5N9V6	A0A4U0UID1	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	Flavodoxin-like domain-containing protein.	0.765
B0A54_06704	B0A54_07351	A0A4U0V116	A0A4U0V1M4	JmjC domain-containing protein.	TYW3 domain-containing protein.	0.603
B0A54_06704	B0A54_08636	A0A4U0V116	A0A4U0URW7	JmjC domain-containing protein.	tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.	0.687
B0A54_06704	B0A54_10839	A0A4U0V116	A0A4U0UWA0	JmjC domain-containing protein.	Uncharacterized protein.	0.514
B0A54_06704	B0A54_12273	A0A4U0V116	A0A4U0UJI9	JmjC domain-containing protein.	tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.	0.685
B0A54_06704	B0A54_13403	A0A4U0V116	A0A4U0UID1	JmjC domain-containing protein.	Flavodoxin-like domain-containing protein.	0.611
B0A54_07351	B0A54_06704	A0A4U0V1M4	A0A4U0V116	TYW3 domain-containing protein.	JmjC domain-containing protein.	0.603
B0A54_07351	B0A54_08636	A0A4U0V1M4	A0A4U0URW7	TYW3 domain-containing protein.	tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.	0.751
B0A54_07351	B0A54_11388	A0A4U0V1M4	A0A4U0UMP9	TYW3 domain-containing protein.	JmjC domain-containing protein.	0.605
B0A54_07351	B0A54_12273	A0A4U0V1M4	A0A4U0UJI9	TYW3 domain-containing protein.	tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.	0.755
B0A54_07351	B0A54_13403	A0A4U0V1M4	A0A4U0UID1	TYW3 domain-containing protein.	Flavodoxin-like domain-containing protein.	0.650
B0A54_08636	B0A54_06704	A0A4U0URW7	A0A4U0V116	tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.	JmjC domain-containing protein.	0.687
B0A54_08636	B0A54_07351	A0A4U0URW7	A0A4U0V1M4	tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.	TYW3 domain-containing protein.	0.751
B0A54_08636	B0A54_10839	A0A4U0URW7	A0A4U0UWA0	tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.	Uncharacterized protein.	0.754
B0A54_08636	B0A54_11388	A0A4U0URW7	A0A4U0UMP9	tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.	JmjC domain-containing protein.	0.688
B0A54_08636	B0A54_13403	A0A4U0URW7	A0A4U0UID1	tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.	Flavodoxin-like domain-containing protein.	0.760
B0A54_09444	B0A54_13403	A0A4V5N921	A0A4U0UID1	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	Flavodoxin-like domain-containing protein.	0.765
B0A54_10839	B0A54_06704	A0A4U0UWA0	A0A4U0V116	Uncharacterized protein.	JmjC domain-containing protein.	0.514
B0A54_10839	B0A54_08636	A0A4U0UWA0	A0A4U0URW7	Uncharacterized protein.	tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.	0.754
B0A54_10839	B0A54_11388	A0A4U0UWA0	A0A4U0UMP9	Uncharacterized protein.	JmjC domain-containing protein.	0.596