Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_13457GTP-binding protein rhoC. (272 aa)    
Predicted Functional Partners:
B0A54_12066
Uncharacterized protein.
    
 0.988
B0A54_03529
Uncharacterized protein.
    
 0.988
B0A54_10935
Uncharacterized protein.
    
 0.969
B0A54_04686
Uncharacterized protein.
    
 0.969
B0A54_16340
Uncharacterized protein.
    
 0.965
B0A54_03217
Uncharacterized protein.
    
 0.965
B0A54_11386
Uncharacterized protein.
   
 0.954
B0A54_06702
Uncharacterized protein.
   
 0.954
B0A54_03630
Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.
    
 0.923
B0A54_02144
Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.
    
 0.923
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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