STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_1339626S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (987 aa)    
Predicted Functional Partners:
B0A54_15196
VWFA domain-containing protein.
   
 0.999
B0A54_13244
PCI domain-containing protein.
   
 0.999
B0A54_11881
VWFA domain-containing protein.
   
 0.999
B0A54_04693
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.999
B0A54_10492
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
 0.999
B0A54_07638
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
 0.999
B0A54_06777
PCI domain-containing protein.
   
 0.999
B0A54_05705
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
 0.999
B0A54_05787
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
0.999
B0A54_05857
PCI domain-containing protein.
   
 0.999
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.