STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_13737PHD-type domain-containing protein. (851 aa)    
Predicted Functional Partners:
B0A54_12705
SPRY domain-containing protein.
   
 0.954
B0A54_11476
SPRY domain-containing protein.
   
 0.954
B0A54_06451
WD_REPEATS_REGION domain-containing protein.
    
 0.952
B0A54_03666
WD_REPEATS_REGION domain-containing protein.
    
 0.952
B0A54_07214
WD_REPEATS_REGION domain-containing protein.
    
 0.945
B0A54_06301
WD_REPEATS_REGION domain-containing protein.
    
 0.945
B0A54_15877
Uncharacterized protein.
    
 
 0.924
B0A54_01755
Uncharacterized protein.
    
 
 0.924
B0A54_06023
SET domain-containing protein.
   
 0.889
B0A54_00833
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
   
 0.889
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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