STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_12182Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family. (236 aa)    
Predicted Functional Partners:
B0A54_11617
Uncharacterized protein.
  
 0.999
B0A54_11074
Uncharacterized protein.
  
 0.999
B0A54_09367
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.999
B0A54_13583
TCTP domain-containing protein; Belongs to the TCTP family.
  
 
 0.977
B0A54_11623
TCTP domain-containing protein; Belongs to the TCTP family.
  
 
 0.977
B0A54_08623
60S ribosomal protein L35.
  
 
 0.969
B0A54_07814
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.965
B0A54_10973
60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 
 0.954
B0A54_04647
60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 
 0.954
B0A54_02156
RRN7-type domain-containing protein.
  
 
 0.954
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.