STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_13563UBIQUITIN_CONJUGAT_2 domain-containing protein. (1193 aa)    
Predicted Functional Partners:
B0A54_08829
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.785
B0A54_14966
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.777
B0A54_08741
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.777
B0A54_12814
Ubiquitin-conjugating enzyme E2 8; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.731
B0A54_07109
Ubiquitin-conjugating enzyme E2 8; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.731
B0A54_07639
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.721
B0A54_02314
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.721
B0A54_07750
E2_bind domain-containing protein.
    
  0.716
B0A54_05826
Uncharacterized protein.
    
  0.716
B0A54_05221
Uncharacterized protein.
    
  0.716
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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