STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_13494Uncharacterized protein. (621 aa)    
Predicted Functional Partners:
B0A54_13493
Homeobox domain-containing protein.
 
      0.889
B0A54_17353
MADS-box domain-containing protein.
   
 
 0.710
B0A54_10800
MADS-box domain-containing protein.
   
 
 0.710
B0A54_07615
Uncharacterized protein.
   
 0.657
B0A54_02337
Uncharacterized protein.
   
 0.657
B0A54_17070
Histone deacetylase RPD3.
    
 0.613
B0A54_16667
Hist_deacetyl domain-containing protein.
    
 0.613
B0A54_12024
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.613
B0A54_10283
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.613
B0A54_14392
Uncharacterized protein.
    
  0.509
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.