STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_12643Putative alpha-L-arabinofuranosidase axhA-1. (344 aa)    
Predicted Functional Partners:
B0A54_02494
Beta-xylanase.
 
    
 0.889
B0A54_03400
Beta-xylanase.
 
   
 0.788
B0A54_09205
Beta-xylanase.
 
    
 0.647
B0A54_04464
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
     
 0.549
B0A54_03874
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
     
 0.549
B0A54_01731
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
 
 
 0.545
B0A54_09453
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
 
 
 0.543
B0A54_08013
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
 
 
 0.529
B0A54_10707
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.499
B0A54_16155
Uncharacterized protein.
    
   0.483
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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