STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_12281Uncharacterized protein; Belongs to the DEAD box helicase family. (783 aa)    
Predicted Functional Partners:
B0A54_16807
Uncharacterized protein.
  
0.959
B0A54_09693
Uncharacterized protein.
  
0.959
B0A54_16502
Uncharacterized protein.
   
 0.956
B0A54_12762
Uncharacterized protein.
   
 0.956
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.946
NOP7-2
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.946
B0A54_09450
Uncharacterized protein.
   
 0.944
B0A54_01735
Uncharacterized protein.
   
 0.944
B0A54_06462
Uncharacterized protein.
   
 
 0.942
B0A54_03677
Uncharacterized protein.
   
 
 0.942
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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