STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_13486Uncharacterized protein. (1034 aa)    
Predicted Functional Partners:
B0A54_17242
t-SNARE coiled-coil homology domain-containing protein.
    
 0.993
B0A54_06753
t-SNARE coiled-coil homology domain-containing protein.
    
 0.993
B0A54_17737
Fungal_trans domain-containing protein.
    
 0.992
B0A54_03550
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
    
 0.992
B0A54_16116
GTP-binding protein ypt1.
   
 0.982
B0A54_09330
GTP-binding protein ypt1.
   
 0.982
B0A54_09984
t-SNARE coiled-coil homology domain-containing protein.
    
 0.975
B0A54_04263
t-SNARE coiled-coil homology domain-containing protein.
    
 0.975
B0A54_05681
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.974
B0A54_00686
Uncharacterized protein.
    
 0.967
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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