STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_11227Uncharacterized protein. (130 aa)    
Predicted Functional Partners:
B0A54_08461
Uncharacterized protein.
    
 0.921
B0A54_17910
Vacuolar-sorting protein snf7.
    
 0.844
B0A54_17285
Vacuolar-sorting protein SNF7.
    
 0.844
B0A54_10677
Vacuolar-sorting protein SNF7.
    
 0.844
B0A54_02834
Ubiquitin-like domain-containing protein.
   
 
 0.654
B0A54_15553
Ubiquitin-like domain-containing protein.
   
 
 0.654
B0A54_04853
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
    
 0.648
B0A54_01894
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
    
 0.648
B0A54_14040
Uncharacterized protein.
    
 0.624
B0A54_13174
Uncharacterized protein.
    
 0.624
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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