STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_09268Uncharacterized protein. (405 aa)    
Predicted Functional Partners:
B0A54_00620
Flavoprotein domain-containing protein.
  
 
 0.945
B0A54_01251
Flavoprotein domain-containing protein.
  
 
 0.945
B0A54_17482
Thymidylat_synt domain-containing protein.
  
 
 0.945
B0A54_14774
Thymidylate synthase.
  
 
 0.899
B0A54_02498
Nucleoside diphosphate kinase.
    
 0.879
B0A54_16442
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
 0.873
B0A54_04464
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
    
 0.860
B0A54_03874
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
    
 0.860
B0A54_09512
Uncharacterized protein.
  
 
 0.832
B0A54_01716
Uncharacterized protein.
  
 
 0.832
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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