STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_09483Uncharacterized protein. (655 aa)    
Predicted Functional Partners:
B0A54_10383
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.855
B0A54_06470
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.818
B0A54_03685
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.818
B0A54_04829
Uncharacterized protein.
   
 0.794
B0A54_01918
Uncharacterized protein.
   
 0.794
B0A54_13779
WD_REPEATS_REGION domain-containing protein.
    
 0.790
B0A54_03995
WD_REPEATS_REGION domain-containing protein.
    
 0.790
B0A54_04866
NUP214 domain-containing protein.
    
 0.788
B0A54_01880
NUP214 domain-containing protein.
    
 0.788
B0A54_14125
Nsp1_C domain-containing protein.
    
 0.782
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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