STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_08724Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (384 aa)    
Predicted Functional Partners:
B0A54_01662
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.655
B0A54_17415
Ribosomal_L14e domain-containing protein.
   
 
 0.635
B0A54_08795
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.635
B0A54_15377
Ribosomal_L14e domain-containing protein.
   
 
 0.635
B0A54_16675
40S ribosomal protein S19.
   
   0.634
B0A54_12996
60S ribosomal protein L43.
   
 
 0.628
B0A54_00505
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.620
B0A54_05385
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
   0.617
B0A54_04935
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.617
B0A54_00244
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
   0.617
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.