STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_10064Uncharacterized protein. (971 aa)    
Predicted Functional Partners:
B0A54_15877
Uncharacterized protein.
      
 0.485
B0A54_01755
Uncharacterized protein.
      
 0.485
B0A54_05739
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
      
 0.454
B0A54_05525
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
      
 0.454
B0A54_03853
SET domain-containing protein.
   
  
 0.443
B0A54_02658
SET domain-containing protein.
   
  
 0.443
B0A54_04851
Structural maintenance of chromosomes protein.
    
 
 0.438
B0A54_01896
Structural maintenance of chromosomes protein.
    
 
 0.438
B0A54_05033
SMC hinge domain-containing protein.
    
 
 0.418
B0A54_01785
Structural maintenance of chromosomes protein.
    
 
 0.418
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.