STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_09709Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (844 aa)    
Predicted Functional Partners:
B0A54_10996
WD_REPEATS_REGION domain-containing protein.
    
 0.958
B0A54_04621
WD_REPEATS_REGION domain-containing protein.
    
 0.958
B0A54_13458
Dynein heavy chain, cytoplasmic.
    
 0.950
B0A54_06620
Dynein heavy chain, cytoplasmic.
    
 0.950
B0A54_00649
Uncharacterized protein.
    
 0.939
B0A54_01281
Uncharacterized protein.
    
 0.939
B0A54_07365
Robl_LC7 domain-containing protein.
   
 0.937
B0A54_10825
Robl_LC7 domain-containing protein.
   
 0.937
B0A54_08240
Uncharacterized protein.
    
 0.840
B0A54_14390
Uncharacterized protein.
   
 
 0.826
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.