STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_09060Uncharacterized protein. (528 aa)    
Predicted Functional Partners:
B0A54_05615
G_PROTEIN_RECEP_F2_4 domain-containing protein.
   
 
 0.980
B0A54_12993
Pre-mRNA-splicing factor ini1.
    
 0.797
B0A54_13904
Small nuclear ribonucleoprotein Sm D2.
    
 0.795
B0A54_07284
Small nuclear ribonucleoprotein Sm D2.
    
 0.795
B0A54_08423
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.787
B0A54_01988
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.787
B0A54_11617
Uncharacterized protein.
    
  0.781
B0A54_11074
Uncharacterized protein.
    
  0.781
B0A54_01607
Small nuclear ribonucleoprotein G.
    
  0.774
B0A54_09575
Small nuclear ribonucleoprotein G.
    
  0.774
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.